Ben Jones

A mathematician who sometimes calls himself a computer scientist.

Download my CV (pdf).
ORCID:0000-0001-7810-7770

Papers and Preprints

  1. Benjamin Jones, S. Ahmed Ullah, S. Wang, and S. Zhao, “Adaptive pseudo-time methods for the Poisson-Boltzmann equation with Eulerian solvent excluded surface”, Communications in Information & Systems, 21(1), 85-123, (2021). (arxiv) (doi)

  2. S. Ahmed Ullah, X. Yang, Ben Jones, S. Zhao, W. Geng, and G. Wei, “Bridging Eulerian and Lagrangian Poisson-Boltzmann solvers by ESES,” Journal of Computational Chemistry. 2023, 1. DOI: doi.org/10.1002/jcc.27239.

  3. Benjamin Jones and Guowei Wei, “Persistent Directed Flag Laplacian,” arXiv:2312.02099 [math.AT], 2023. Submitted.

Contributed Talks

  1. SIAM Conference on Mathematics of Data Science (MDS24), Atlanta, GA. “Persistent Directed Flag Laplacian,” October 2024.

  2. 4th Workshop on Computational Persistence (ComPer), Graz University of Technology (remote). “Efficient Computation of Persistent Laplacians,” September 2024.

  3. Mathematical Biosciences Workshop, Penn State. “Persistent Directed Flag Laplacian,” August 2024.

Seminar Talks

  1. MSU Operator Algebras Reading Seminar. “The story of how Vaughan Jones used operator algebras to spark a revolution in topology,” March 2024.

  2. University of Alabama Applied Math Seminar, Tuscaloosa, AL. “Adaptive Pseudo-Time Methods for the Poisson-Boltzmann Equation with Eulerian Solvent Excluded Surface,” December 2020.

Master’s thesis

  • B. Jones. “Adaptive pseudo-time methods for the Poisson-Boltzmann equation with Eulerian solvent excluded surface,” (2021). Master’s thesis at The University of Alabama.
    Committee: Shan Zhao (chair), Xiaoyan Hong, Mojdeh Rasoulzadeh, and Wei Zhu.